BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005C07LP1|AL425351
(759 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1794 1282 0.0
>3x_Contig1794
Length = 36744
Score = 1282 bits (633), Expect = 0.0
Identities = 717/760 (94%), Gaps = 1/760 (0%)
Strand = Plus / Minus
Query: 1 actttanttaagatgatgatttagacgagtgtaaacaaggctccaaatcacaactttacg 60
|||||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 29870 actttattgaagatgatgatttagacgagtgtgaacaaggctccaaatcacaaccgtacg 29811
Query: 61 atagagatgaaatttggtctatcttcaacaaaggtagtaaaaggaaatactttgattcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29810 atagagatgaaatttggtctatcttcaacaaaggtagtaaaaggaaatactttgattcag 29751
Query: 121 atgatgacgacgatatggaagctaacgaaatggagatctttgaagaagaggaaagagcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29750 atgatgacgacgatatggaagctaacgaaatggagatctttgaagaagaggaaagagcta 29691
Query: 181 caaaaatggcgaa-cttgaagataagagggagcaagcttggttaaaggaacacgaaaaaa 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29690 caaaaatggcgaagcttgaagataagagggagcaagcttggttaaaggaacacgaaaaaa 29631
Query: 240 ggaaaaagaaactgaagaaaagccattcataaacatgtcaatgtacgaattgaatatatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29630 ggaaaaagaaactgaagaaaagccattcataaacatgtcaatgtacgaattgaatatatc 29571
Query: 300 atttattcatctaawatacaattaattaatgcattagttgaaatcatagatccaaatgaa 359
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29570 atttattcatctaatatacaattaattaatgcattagttgaaatcatagatccaaatgaa 29511
Query: 360 atcaacattttgaagtttgtgtactattataaaattgctttacaatatcaactctataaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29510 atcaacattttgaagtttgtgtactattataaaattgctttacaatatcaactctataaa 29451
Query: 420 tccataacatactgcaaagattatgataatgaagatcacaacaccagtaatataatgcca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29450 tccataacatactgcaaagattatgataatgaagatcacaacaccagtaatataatgcca 29391
Query: 480 agtcggtgcaaacgtgaatcttgaaaamattaawaamaaaraccatgcaccgagaatwaa 539
||| ||||||||||||||||||||||| ||||| || ||| |||||||||||||||| ||
Sbjct: 29390 agtaggtgcaaacgtgaatcttgaaaacattaataacaaagaccatgcaccgagaattaa 29331
Query: 540 ggatatggataatgatataaawawmatcgtmaaaawaraagtttcgttttctagttgtgt 599
|||||||||||||||||| || | ||||| |||| | ||||||||||||||||||||||
Sbjct: 29330 ggatatggataatgatatgaatatcatcgtcaaaatagaagtttcgttttctagttgtgt 29271
Query: 600 atcatcgttgagtgatttaaaaaaaratgwaatrawamaaatggwtacgcctgttgtaaa 659
|||||||||||||||||| || ||| ||| || | | ||||| ||||||||| || ||
Sbjct: 29270 atcatcgttgagtgatttgaacaaagatgtcatgataccaatggttacgcctgtagtcaa 29211
Query: 660 acaggatawtarmaataaaraaacataaaaaaaaratatcacctggtcatgctcgagctc 719
|||||||| || ||| || ||||||| || ||| ||||||||||||||||||||| |||
Sbjct: 29210 acaggatattagcaatgaagaaacatagaagaaagatatcacctggtcatgctcgaactc 29151
Query: 720 atatattgattctgaattttgttcttcgagttcmaaaaac 759
||||||||||||||||||||||||||||||||| |||||
Sbjct: 29150 atatattgattctgaattttgttcttcgagttcccaaaac 29111
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6994
Number of Sequences: 1807
Number of extensions: 6994
Number of successful extensions: 223
Number of sequences better than 1.0e-20: 1
length of query: 759
length of database: 10,358,551
effective HSP length: 16
effective length of query: 743
effective length of database: 10,329,639
effective search space: 7674921777
effective search space used: 7674921777
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)